Articles
All vignettes
- Discretised distributions
Distributions and their discretisation in epinowcast
- Getting Started with Epinowcast: Nowcasting
A quick start example demonstrating use of epinowcast to nowcast hospital admissions.
- Hierarchical nowcasting of age stratified COVID-19 hospitalisations in Germany
A case study exploring hierarchical models of varying complexity to jointly nowcast age stratified COVID-19 hospitalisations in Germany.
- Model definition and implementation
Model formulation and implementation details
- Case studies
A place to document how epinowcast has been used
- Estimating the effective reproduction number in real-time for a single timeseries with reporting delays
A walk through of a simple approach to jointly estimating the effective reproduction number over time and the delay from a positive test to this test being reported.
- Resources to help with model fitting using Stan
How to address issues you may encounter with Stan